Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDC27470.1 | SDC51602.1 | SAMN05444679_102119 | SAMN05444679_103261 | N-carbamoyl-L-amino-acid hydrolase. | Dihydropyrimidinase. | 0.869 |
SDC27470.1 | SDC62396.1 | SAMN05444679_102119 | SAMN05444679_104142 | N-carbamoyl-L-amino-acid hydrolase. | N-carbamoyl-L-amino-acid hydrolase. | 0.824 |
SDC27470.1 | SDE72011.1 | SAMN05444679_102119 | SAMN05444679_12925 | N-carbamoyl-L-amino-acid hydrolase. | N-carbamoyl-L-amino-acid hydrolase. | 0.824 |
SDC27470.1 | carB | SAMN05444679_102119 | SAMN05444679_110236 | N-carbamoyl-L-amino-acid hydrolase. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.526 |
SDC27470.1 | pyrB | SAMN05444679_102119 | SAMN05444679_118136 | N-carbamoyl-L-amino-acid hydrolase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.479 |
SDC27470.1 | pyrD | SAMN05444679_102119 | SAMN05444679_111171 | N-carbamoyl-L-amino-acid hydrolase. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.650 |
SDC51568.1 | SDC51602.1 | SAMN05444679_103260 | SAMN05444679_103261 | Predicted amidohydrolase. | Dihydropyrimidinase. | 0.925 |
SDC51568.1 | pyrD | SAMN05444679_103260 | SAMN05444679_111171 | Predicted amidohydrolase. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.472 |
SDC51602.1 | SDC27470.1 | SAMN05444679_103261 | SAMN05444679_102119 | Dihydropyrimidinase. | N-carbamoyl-L-amino-acid hydrolase. | 0.869 |
SDC51602.1 | SDC51568.1 | SAMN05444679_103261 | SAMN05444679_103260 | Dihydropyrimidinase. | Predicted amidohydrolase. | 0.925 |
SDC51602.1 | SDC62396.1 | SAMN05444679_103261 | SAMN05444679_104142 | Dihydropyrimidinase. | N-carbamoyl-L-amino-acid hydrolase. | 0.866 |
SDC51602.1 | SDE18939.1 | SAMN05444679_103261 | SAMN05444679_118135 | Dihydropyrimidinase. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | 0.914 |
SDC51602.1 | SDE72011.1 | SAMN05444679_103261 | SAMN05444679_12925 | Dihydropyrimidinase. | N-carbamoyl-L-amino-acid hydrolase. | 0.865 |
SDC51602.1 | carA | SAMN05444679_103261 | SAMN05444679_110237 | Dihydropyrimidinase. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.961 |
SDC51602.1 | carB | SAMN05444679_103261 | SAMN05444679_110236 | Dihydropyrimidinase. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.967 |
SDC51602.1 | pyrB | SAMN05444679_103261 | SAMN05444679_118136 | Dihydropyrimidinase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.996 |
SDC51602.1 | pyrD | SAMN05444679_103261 | SAMN05444679_111171 | Dihydropyrimidinase. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.923 |
SDC51602.1 | pyrE | SAMN05444679_103261 | SAMN05444679_10545 | Dihydropyrimidinase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.871 |
SDC62396.1 | SDC27470.1 | SAMN05444679_104142 | SAMN05444679_102119 | N-carbamoyl-L-amino-acid hydrolase. | N-carbamoyl-L-amino-acid hydrolase. | 0.824 |
SDC62396.1 | SDC51602.1 | SAMN05444679_104142 | SAMN05444679_103261 | N-carbamoyl-L-amino-acid hydrolase. | Dihydropyrimidinase. | 0.866 |
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