Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDC74889.1 | SDC74925.1 | SAMN05444679_10555 | SAMN05444679_10556 | Protein of unknown function. | amidase/aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A. | 0.894 |
SDC74889.1 | SDC74999.1 | SAMN05444679_10555 | SAMN05444679_10558 | Protein of unknown function. | NitT/TauT family transport system ATP-binding protein. | 0.812 |
SDC74889.1 | SDC75039.1 | SAMN05444679_10555 | SAMN05444679_10559 | Protein of unknown function. | NitT/TauT family transport system permease protein. | 0.774 |
SDC74889.1 | SDC75114.1 | SAMN05444679_10555 | SAMN05444679_10561 | Protein of unknown function. | Allophanate hydrolase. | 0.856 |
SDC74889.1 | SDD03265.1 | SAMN05444679_10555 | SAMN05444679_10752 | Protein of unknown function. | Glutamate synthase (NADH) large subunit. | 0.905 |
SDC74889.1 | gatB | SAMN05444679_10555 | SAMN05444679_10542 | Protein of unknown function. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.433 |
SDC74925.1 | SDC74889.1 | SAMN05444679_10556 | SAMN05444679_10555 | amidase/aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A. | Protein of unknown function. | 0.894 |
SDC74925.1 | SDC74999.1 | SAMN05444679_10556 | SAMN05444679_10558 | amidase/aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A. | NitT/TauT family transport system ATP-binding protein. | 0.785 |
SDC74925.1 | SDC75039.1 | SAMN05444679_10556 | SAMN05444679_10559 | amidase/aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A. | NitT/TauT family transport system permease protein. | 0.785 |
SDC74925.1 | SDC75114.1 | SAMN05444679_10556 | SAMN05444679_10561 | amidase/aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A. | Allophanate hydrolase. | 0.881 |
SDC74925.1 | SDD03265.1 | SAMN05444679_10556 | SAMN05444679_10752 | amidase/aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A. | Glutamate synthase (NADH) large subunit. | 0.833 |
SDC74925.1 | aspS | SAMN05444679_10556 | SAMN05444679_107146 | amidase/aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A. | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.861 |
SDC74925.1 | gatB | SAMN05444679_10556 | SAMN05444679_10542 | amidase/aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.995 |
SDC74925.1 | gatC | SAMN05444679_10556 | SAMN05444679_10540 | amidase/aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.986 |
SDC74925.1 | gltX | SAMN05444679_10556 | SAMN05444679_101120 | amidase/aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A. | glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | 0.808 |
SDC74925.1 | guaA | SAMN05444679_10556 | SAMN05444679_11082 | amidase/aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.787 |
SDC74999.1 | SDC74889.1 | SAMN05444679_10558 | SAMN05444679_10555 | NitT/TauT family transport system ATP-binding protein. | Protein of unknown function. | 0.812 |
SDC74999.1 | SDC74925.1 | SAMN05444679_10558 | SAMN05444679_10556 | NitT/TauT family transport system ATP-binding protein. | amidase/aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A. | 0.785 |
SDC74999.1 | SDC75039.1 | SAMN05444679_10558 | SAMN05444679_10559 | NitT/TauT family transport system ATP-binding protein. | NitT/TauT family transport system permease protein. | 0.979 |
SDC74999.1 | SDC75114.1 | SAMN05444679_10558 | SAMN05444679_10561 | NitT/TauT family transport system ATP-binding protein. | Allophanate hydrolase. | 0.848 |
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