STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC75081.1NitT/TauT family transport system substrate-binding protein. (333 aa)    
Predicted Functional Partners:
SDC75039.1
NitT/TauT family transport system permease protein.
 
 
 0.982
SDC74999.1
NitT/TauT family transport system ATP-binding protein.
 
 
 0.969
SDC75114.1
Allophanate hydrolase.
 
     0.829
SDC74889.1
Protein of unknown function.
 
    0.814
SDD86670.1
NitT/TauT family transport system permease protein.
 
 
 0.795
SDD83827.1
Sulfonate transport system permease protein.
 
 
 0.785
SDC78123.1
NitT/TauT family transport system permease protein.
 
 
 0.783
SDC74925.1
amidase/aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A.
       0.776
SDC74959.1
Protein of unknown function.
       0.773
SDE61471.1
NitT/TauT family transport system permease protein.
 
 
 0.773
Your Current Organism:
Variovorax sp. CF079
NCBI taxonomy Id: 1882774
Other names: V. sp. CF079
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.