STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD08877.1Cystathionine gamma-lyase. (395 aa)    
Predicted Functional Partners:
SDD08838.1
Cystathionine beta-synthase.
 
 0.996
SDC63034.1
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 0.924
SDC11644.1
Cysteine synthase A.
 
 0.913
SDC36663.1
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase.
 
 
 0.899
SDC77668.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
  
 
 0.893
SDE17236.1
5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family.
  
 0.882
SDD30679.1
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase.
 
 
 0.867
SDE29807.1
Homoserine dehydrogenase.
  
 
 0.854
metE
Methionine synthase (B12-independent); Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.
  
 
 0.846
SDD84302.1
Sulfite reductase (NADPH) hemoprotein beta-component.
  
 0.839
Your Current Organism:
Variovorax sp. CF079
NCBI taxonomy Id: 1882774
Other names: V. sp. CF079
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