STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD08955.1Amino acid ABC transporter membrane protein 2, PAAT family. (236 aa)    
Predicted Functional Partners:
SDD08929.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
  0.992
SDD08988.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
 
 
0.988
SDD09013.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 
  0.988
SDC77868.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
  0.981
SDC58473.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.954
SDD56607.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.954
SDC14962.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.953
SDC61764.1
Glutamate/aspartate transport system ATP-binding protein.
 0.952
SDC51493.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.951
SDC97158.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.951
Your Current Organism:
Variovorax sp. CF079
NCBI taxonomy Id: 1882774
Other names: V. sp. CF079
Server load: low (14%) [HD]