Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDC30473.1 | SDC34521.1 | SAMN05444679_102212 | SAMN05444679_102334 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | ferredoxin-NAD(P)+ reductase (naphthalene dioxygenase ferredoxin-specific). | 0.900 |
SDC30473.1 | SDC52359.1 | SAMN05444679_102212 | SAMN05444679_103280 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Acyl carrier protein. | 0.897 |
SDC30473.1 | SDC66793.1 | SAMN05444679_102212 | SAMN05444679_104260 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Amino acid adenylation domain-containing protein. | 0.548 |
SDC30473.1 | SDD03265.1 | SAMN05444679_102212 | SAMN05444679_10752 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Glutamate synthase (NADH) large subunit. | 0.868 |
SDC30473.1 | SDD10108.1 | SAMN05444679_102212 | SAMN05444679_107266 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Short chain dehydrogenase. | 0.640 |
SDC30473.1 | SDD30130.1 | SAMN05444679_102212 | SAMN05444679_109142 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Amino acid adenylation domain-containing protein. | 0.896 |
SDC30473.1 | SDD91165.1 | SAMN05444679_102212 | SAMN05444679_11520 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | CDP-4-dehydro-6-deoxyglucose reductase. | 0.897 |
SDC30473.1 | SDE41001.1 | SAMN05444679_102212 | SAMN05444679_12211 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Amino acid adenylation domain-containing protein. | 0.936 |
SDC30473.1 | SDE66490.1 | SAMN05444679_102212 | SAMN05444679_12753 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Vanillate O-demethylase ferredoxin subunit. | 0.680 |
SDC34521.1 | SDC30473.1 | SAMN05444679_102334 | SAMN05444679_102212 | ferredoxin-NAD(P)+ reductase (naphthalene dioxygenase ferredoxin-specific). | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.900 |
SDC34521.1 | SDC52359.1 | SAMN05444679_102334 | SAMN05444679_103280 | ferredoxin-NAD(P)+ reductase (naphthalene dioxygenase ferredoxin-specific). | Acyl carrier protein. | 0.829 |
SDC34521.1 | SDC66793.1 | SAMN05444679_102334 | SAMN05444679_104260 | ferredoxin-NAD(P)+ reductase (naphthalene dioxygenase ferredoxin-specific). | Amino acid adenylation domain-containing protein. | 0.568 |
SDC34521.1 | SDD03265.1 | SAMN05444679_102334 | SAMN05444679_10752 | ferredoxin-NAD(P)+ reductase (naphthalene dioxygenase ferredoxin-specific). | Glutamate synthase (NADH) large subunit. | 0.920 |
SDC34521.1 | SDD10108.1 | SAMN05444679_102334 | SAMN05444679_107266 | ferredoxin-NAD(P)+ reductase (naphthalene dioxygenase ferredoxin-specific). | Short chain dehydrogenase. | 0.821 |
SDC34521.1 | SDD30130.1 | SAMN05444679_102334 | SAMN05444679_109142 | ferredoxin-NAD(P)+ reductase (naphthalene dioxygenase ferredoxin-specific). | Amino acid adenylation domain-containing protein. | 0.820 |
SDC34521.1 | SDD91165.1 | SAMN05444679_102334 | SAMN05444679_11520 | ferredoxin-NAD(P)+ reductase (naphthalene dioxygenase ferredoxin-specific). | CDP-4-dehydro-6-deoxyglucose reductase. | 0.839 |
SDC34521.1 | SDE41001.1 | SAMN05444679_102334 | SAMN05444679_12211 | ferredoxin-NAD(P)+ reductase (naphthalene dioxygenase ferredoxin-specific). | Amino acid adenylation domain-containing protein. | 0.950 |
SDC34521.1 | SDE66490.1 | SAMN05444679_102334 | SAMN05444679_12753 | ferredoxin-NAD(P)+ reductase (naphthalene dioxygenase ferredoxin-specific). | Vanillate O-demethylase ferredoxin subunit. | 0.904 |
SDC34521.1 | gcvP | SAMN05444679_102334 | SAMN05444679_117127 | ferredoxin-NAD(P)+ reductase (naphthalene dioxygenase ferredoxin-specific). | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.799 |
SDC52359.1 | SDC30473.1 | SAMN05444679_103280 | SAMN05444679_102212 | Acyl carrier protein. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.897 |
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