STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD17705.1Protein of unknown function. (107 aa)    
Predicted Functional Partners:
SDE36091.1
Glutamate--cysteine ligase.
  
     0.729
SDE19725.1
Protein of unknown function.
  
     0.709
SDC75684.1
Zinc-finger domain-containing protein.
  
     0.701
SDC34837.1
Uncharacterized membrane protein.
  
     0.687
SDD18401.1
Succinate dehydrogenase subunit D.
  
     0.648
SDC10998.1
Protein of unknown function.
  
     0.623
SDE31771.1
Phasin family protein.
  
     0.619
SDD18377.1
Succinate dehydrogenase subunit C.
  
     0.618
SDD17758.1
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
       0.593
SDD02548.1
Cytochrome c biogenesis protein.
  
     0.583
Your Current Organism:
Variovorax sp. CF079
NCBI taxonomy Id: 1882774
Other names: V. sp. CF079
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.