STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD14742.1Putative Flp pilus-assembly TadE/G-like. (424 aa)    
Predicted Functional Partners:
SDD14645.1
Pilus assembly protein CpaE.
 
  
 0.975
SDD14714.1
TadE-like protein.
 
    0.959
SDD14682.1
Flp pilus assembly protein TadG.
 
    0.958
SDD14913.1
Pilus assembly protein CpaB.
 
  
 0.957
SDD14575.1
Tight adherence protein B.
 
  
 0.940
SDD14540.1
Tight adherence protein C.
 
    0.913
SDD14611.1
Pilus assembly protein CpaF.
 
  
 0.892
SDD14876.1
Pilus assembly protein CpaC; Belongs to the bacterial secretin family.
 
  
 0.857
SDD14947.1
Prepilin peptidase CpaA.
 
     0.810
SDC94747.1
Antitoxin component YwqK of the YwqJK toxin-antitoxin module.
  
     0.759
Your Current Organism:
Variovorax sp. CF079
NCBI taxonomy Id: 1882774
Other names: V. sp. CF079
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.