STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD29318.1Protein of unknown function. (492 aa)    
Predicted Functional Partners:
SDD29281.1
Membrane protease subunit, stomatin/prohibitin family, contains C-terminal Zn-ribbon domain.
 
  
 0.957
SDD29352.1
Protein of unknown function.
 
     0.957
speE
Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
 
     0.903
SDD29420.1
Monoamine oxidase.
 
     0.879
SDC91118.1
Uncharacterized protein.
  
  
 0.875
SDD29653.1
S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine.
 
     0.749
SDC94427.1
Hypothetical protein.
  
     0.525
SDD28272.1
Cyclic nucleotide-binding domain-containing protein.
  
   
 0.514
SDE23208.1
General secretion pathway protein L.
  
     0.505
SDE23105.1
General secretion pathway protein H.
  
     0.501
Your Current Organism:
Variovorax sp. CF079
NCBI taxonomy Id: 1882774
Other names: V. sp. CF079
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