STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD41888.1Membrane protein implicated in regulation of membrane protease activity. (141 aa)    
Predicted Functional Partners:
SDD41928.1
Regulator of protease activity HflC, stomatin/prohibitin superfamily.
 
  
 0.886
cobS
Cobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
   
    0.839
SDD77316.1
Hypothetical protein.
  
     0.748
SDD87217.1
4-amino-4-deoxy-L-arabinose transferase.
  
     0.741
SDD41848.1
Ornithine decarboxylase.
 
     0.712
SDC94456.1
Protein of unknown function.
  
     0.704
SDD20299.1
HemY protein.
  
     0.697
SDD42018.1
Response regulator receiver domain-containing protein.
 
     0.662
SDE31771.1
Phasin family protein.
  
     0.653
SDD07505.1
Protein of unknown function.
  
     0.650
Your Current Organism:
Variovorax sp. CF079
NCBI taxonomy Id: 1882774
Other names: V. sp. CF079
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