Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDC12661.1 | SDD37913.1 | SAMN05444679_101393 | SAMN05444679_1106 | Transcriptional regulator, GntR family. | Transcriptional regulator, GntR family. | 0.417 |
SDC12661.1 | SDD43068.1 | SAMN05444679_101393 | SAMN05444679_110140 | Transcriptional regulator, GntR family. | Ribosomal protein L3 glutamine methyltransferase; Belongs to the protein N5-glutamine methyltransferase family. | 0.408 |
SDD37705.1 | SDD37752.1 | SAMN05444679_1101 | SAMN05444679_1102 | Hypothetical protein. | Tripartite-type tricarboxylate transporter, receptor component TctC. | 0.773 |
SDD37705.1 | SDD37788.1 | SAMN05444679_1101 | SAMN05444679_1103 | Hypothetical protein. | Tripartite ATP-independent transporter solute receptor, DctP family. | 0.773 |
SDD37705.1 | SDD37833.1 | SAMN05444679_1101 | SAMN05444679_1104 | Hypothetical protein. | Gluconate 5-dehydrogenase. | 0.655 |
SDD37705.1 | SDD37867.1 | SAMN05444679_1101 | SAMN05444679_1105 | Hypothetical protein. | Mannonate dehydratase. | 0.645 |
SDD37705.1 | SDD37913.1 | SAMN05444679_1101 | SAMN05444679_1106 | Hypothetical protein. | Transcriptional regulator, GntR family. | 0.445 |
SDD37752.1 | SDD37705.1 | SAMN05444679_1102 | SAMN05444679_1101 | Tripartite-type tricarboxylate transporter, receptor component TctC. | Hypothetical protein. | 0.773 |
SDD37752.1 | SDD37788.1 | SAMN05444679_1102 | SAMN05444679_1103 | Tripartite-type tricarboxylate transporter, receptor component TctC. | Tripartite ATP-independent transporter solute receptor, DctP family. | 0.817 |
SDD37752.1 | SDD37833.1 | SAMN05444679_1102 | SAMN05444679_1104 | Tripartite-type tricarboxylate transporter, receptor component TctC. | Gluconate 5-dehydrogenase. | 0.655 |
SDD37752.1 | SDD37867.1 | SAMN05444679_1102 | SAMN05444679_1105 | Tripartite-type tricarboxylate transporter, receptor component TctC. | Mannonate dehydratase. | 0.646 |
SDD37752.1 | SDD37913.1 | SAMN05444679_1102 | SAMN05444679_1106 | Tripartite-type tricarboxylate transporter, receptor component TctC. | Transcriptional regulator, GntR family. | 0.445 |
SDD37788.1 | SDD37705.1 | SAMN05444679_1103 | SAMN05444679_1101 | Tripartite ATP-independent transporter solute receptor, DctP family. | Hypothetical protein. | 0.773 |
SDD37788.1 | SDD37752.1 | SAMN05444679_1103 | SAMN05444679_1102 | Tripartite ATP-independent transporter solute receptor, DctP family. | Tripartite-type tricarboxylate transporter, receptor component TctC. | 0.817 |
SDD37788.1 | SDD37833.1 | SAMN05444679_1103 | SAMN05444679_1104 | Tripartite ATP-independent transporter solute receptor, DctP family. | Gluconate 5-dehydrogenase. | 0.655 |
SDD37788.1 | SDD37867.1 | SAMN05444679_1103 | SAMN05444679_1105 | Tripartite ATP-independent transporter solute receptor, DctP family. | Mannonate dehydratase. | 0.645 |
SDD37788.1 | SDD37913.1 | SAMN05444679_1103 | SAMN05444679_1106 | Tripartite ATP-independent transporter solute receptor, DctP family. | Transcriptional regulator, GntR family. | 0.445 |
SDD37833.1 | SDD37705.1 | SAMN05444679_1104 | SAMN05444679_1101 | Gluconate 5-dehydrogenase. | Hypothetical protein. | 0.655 |
SDD37833.1 | SDD37752.1 | SAMN05444679_1104 | SAMN05444679_1102 | Gluconate 5-dehydrogenase. | Tripartite-type tricarboxylate transporter, receptor component TctC. | 0.655 |
SDD37833.1 | SDD37788.1 | SAMN05444679_1104 | SAMN05444679_1103 | Gluconate 5-dehydrogenase. | Tripartite ATP-independent transporter solute receptor, DctP family. | 0.655 |
page 1 of 2