Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDC26558.1 | SDC27292.1 | SAMN05444679_10293 | SAMN05444679_102114 | PAS domain S-box-containing protein. | Adenylate and Guanylate cyclase catalytic domain-containing protein. | 0.998 |
SDC26558.1 | SDC29151.1 | SAMN05444679_10293 | SAMN05444679_102171 | PAS domain S-box-containing protein. | Hypothetical protein. | 0.998 |
SDC26558.1 | SDC89573.1 | SAMN05444679_10293 | SAMN05444679_10629 | PAS domain S-box-containing protein. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.988 |
SDC26558.1 | SDC97609.1 | SAMN05444679_10293 | SAMN05444679_106296 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.997 |
SDC26558.1 | SDC97666.1 | SAMN05444679_10293 | SAMN05444679_106298 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.997 |
SDC26558.1 | SDD10326.1 | SAMN05444679_10293 | SAMN05444679_107275 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SDC26558.1 | SDD21749.1 | SAMN05444679_10293 | SAMN05444679_108256 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SDC26558.1 | SDD21913.1 | SAMN05444679_10293 | SAMN05444679_108262 | PAS domain S-box-containing protein. | PAS/PAC sensor signal transduction histidine kinase. | 0.999 |
SDC26558.1 | SDD39066.1 | SAMN05444679_10293 | SAMN05444679_11035 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SDC26558.1 | SDD65041.1 | SAMN05444679_10293 | SAMN05444679_112133 | PAS domain S-box-containing protein. | GAF domain-containing protein. | 0.999 |
SDC27292.1 | SDC26558.1 | SAMN05444679_102114 | SAMN05444679_10293 | Adenylate and Guanylate cyclase catalytic domain-containing protein. | PAS domain S-box-containing protein. | 0.998 |
SDC27292.1 | SDC29151.1 | SAMN05444679_102114 | SAMN05444679_102171 | Adenylate and Guanylate cyclase catalytic domain-containing protein. | Hypothetical protein. | 0.978 |
SDC27292.1 | SDC89573.1 | SAMN05444679_102114 | SAMN05444679_10629 | Adenylate and Guanylate cyclase catalytic domain-containing protein. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.931 |
SDC27292.1 | SDC97609.1 | SAMN05444679_102114 | SAMN05444679_106296 | Adenylate and Guanylate cyclase catalytic domain-containing protein. | Signal transduction histidine kinase. | 0.957 |
SDC27292.1 | SDC97666.1 | SAMN05444679_102114 | SAMN05444679_106298 | Adenylate and Guanylate cyclase catalytic domain-containing protein. | Signal transduction histidine kinase. | 0.956 |
SDC27292.1 | SDD10326.1 | SAMN05444679_102114 | SAMN05444679_107275 | Adenylate and Guanylate cyclase catalytic domain-containing protein. | Signal transduction histidine kinase. | 0.988 |
SDC27292.1 | SDD21749.1 | SAMN05444679_102114 | SAMN05444679_108256 | Adenylate and Guanylate cyclase catalytic domain-containing protein. | PAS domain S-box-containing protein. | 0.997 |
SDC27292.1 | SDD21913.1 | SAMN05444679_102114 | SAMN05444679_108262 | Adenylate and Guanylate cyclase catalytic domain-containing protein. | PAS/PAC sensor signal transduction histidine kinase. | 0.982 |
SDC27292.1 | SDD39066.1 | SAMN05444679_102114 | SAMN05444679_11035 | Adenylate and Guanylate cyclase catalytic domain-containing protein. | Signal transduction histidine kinase. | 0.979 |
SDC27292.1 | SDD65041.1 | SAMN05444679_102114 | SAMN05444679_112133 | Adenylate and Guanylate cyclase catalytic domain-containing protein. | GAF domain-containing protein. | 0.999 |
page 1 of 6