Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDC27727.1 | SDD61282.1 | SAMN05444679_102126 | SAMN05444679_11227 | Hydroxypyruvate reductase. | 2-hydroxy-3-oxopropionate reductase. | 0.712 |
SDD55076.1 | SDD56276.1 | SAMN05444679_111156 | SAMN05444679_111191 | Methylmalonate-semialdehyde dehydrogenase [acylating]. | propionyl-CoA carboxylase alpha chain. | 0.779 |
SDD55076.1 | SDD61282.1 | SAMN05444679_111156 | SAMN05444679_11227 | Methylmalonate-semialdehyde dehydrogenase [acylating]. | 2-hydroxy-3-oxopropionate reductase. | 0.657 |
SDD56276.1 | SDD55076.1 | SAMN05444679_111191 | SAMN05444679_111156 | propionyl-CoA carboxylase alpha chain. | Methylmalonate-semialdehyde dehydrogenase [acylating]. | 0.779 |
SDD56276.1 | SDD61282.1 | SAMN05444679_111191 | SAMN05444679_11227 | propionyl-CoA carboxylase alpha chain. | 2-hydroxy-3-oxopropionate reductase. | 0.660 |
SDD56276.1 | SDE09650.1 | SAMN05444679_111191 | SAMN05444679_11772 | propionyl-CoA carboxylase alpha chain. | Enoyl-CoA hydratase/carnithine racemase. | 0.483 |
SDD56276.1 | SDE09702.1 | SAMN05444679_111191 | SAMN05444679_11774 | propionyl-CoA carboxylase alpha chain. | Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase. | 0.779 |
SDD61282.1 | SDC27727.1 | SAMN05444679_11227 | SAMN05444679_102126 | 2-hydroxy-3-oxopropionate reductase. | Hydroxypyruvate reductase. | 0.712 |
SDD61282.1 | SDD55076.1 | SAMN05444679_11227 | SAMN05444679_111156 | 2-hydroxy-3-oxopropionate reductase. | Methylmalonate-semialdehyde dehydrogenase [acylating]. | 0.657 |
SDD61282.1 | SDD56276.1 | SAMN05444679_11227 | SAMN05444679_111191 | 2-hydroxy-3-oxopropionate reductase. | propionyl-CoA carboxylase alpha chain. | 0.660 |
SDD61282.1 | SDD61316.1 | SAMN05444679_11227 | SAMN05444679_11228 | 2-hydroxy-3-oxopropionate reductase. | 4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family. | 0.906 |
SDD61282.1 | SDD61348.1 | SAMN05444679_11227 | SAMN05444679_11229 | 2-hydroxy-3-oxopropionate reductase. | D-glucarate dehydratase. | 0.748 |
SDD61282.1 | SDD61383.1 | SAMN05444679_11227 | SAMN05444679_11230 | 2-hydroxy-3-oxopropionate reductase. | Tripartite-type tricarboxylate transporter, receptor component TctC. | 0.669 |
SDD61282.1 | SDE09650.1 | SAMN05444679_11227 | SAMN05444679_11772 | 2-hydroxy-3-oxopropionate reductase. | Enoyl-CoA hydratase/carnithine racemase. | 0.766 |
SDD61282.1 | SDE09702.1 | SAMN05444679_11227 | SAMN05444679_11774 | 2-hydroxy-3-oxopropionate reductase. | Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase. | 0.699 |
SDD61282.1 | SDE75669.1 | SAMN05444679_11227 | SAMN05444679_13052 | 2-hydroxy-3-oxopropionate reductase. | Hydroxypyruvate isomerase; Belongs to the hyi family. | 0.701 |
SDD61282.1 | SDE75699.1 | SAMN05444679_11227 | SAMN05444679_13053 | 2-hydroxy-3-oxopropionate reductase. | Tartronate-semialdehyde synthase; Belongs to the TPP enzyme family. | 0.888 |
SDD61316.1 | SDD61282.1 | SAMN05444679_11228 | SAMN05444679_11227 | 4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family. | 2-hydroxy-3-oxopropionate reductase. | 0.906 |
SDD61316.1 | SDD61348.1 | SAMN05444679_11228 | SAMN05444679_11229 | 4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family. | D-glucarate dehydratase. | 0.939 |
SDD61316.1 | SDD61383.1 | SAMN05444679_11228 | SAMN05444679_11230 | 4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family. | Tripartite-type tricarboxylate transporter, receptor component TctC. | 0.697 |
page 1 of 2