Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDC95022.1 | SDD03265.1 | SAMN05444679_106205 | SAMN05444679_10752 | Hippurate hydrolase. | Glutamate synthase (NADH) large subunit. | 0.796 |
SDC95022.1 | SDD72114.1 | SAMN05444679_106205 | SAMN05444679_11320 | Hippurate hydrolase. | Hippurate hydrolase. | 0.689 |
SDC95022.1 | dapD | SAMN05444679_106205 | SAMN05444679_110137 | Hippurate hydrolase. | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family. | 0.480 |
SDC95022.1 | dapF | SAMN05444679_106205 | SAMN05444679_104189 | Hippurate hydrolase. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.527 |
SDD03265.1 | SDC95022.1 | SAMN05444679_10752 | SAMN05444679_106205 | Glutamate synthase (NADH) large subunit. | Hippurate hydrolase. | 0.796 |
SDD03265.1 | SDD72114.1 | SAMN05444679_10752 | SAMN05444679_11320 | Glutamate synthase (NADH) large subunit. | Hippurate hydrolase. | 0.796 |
SDD03265.1 | dapF | SAMN05444679_10752 | SAMN05444679_104189 | Glutamate synthase (NADH) large subunit. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.982 |
SDD72078.1 | SDD72114.1 | SAMN05444679_11319 | SAMN05444679_11320 | Hypothetical protein. | Hippurate hydrolase. | 0.545 |
SDD72078.1 | SDD72156.1 | SAMN05444679_11319 | SAMN05444679_11321 | Hypothetical protein. | Tripartite-type tricarboxylate transporter, receptor component TctC. | 0.466 |
SDD72114.1 | SDC95022.1 | SAMN05444679_11320 | SAMN05444679_106205 | Hippurate hydrolase. | Hippurate hydrolase. | 0.689 |
SDD72114.1 | SDD03265.1 | SAMN05444679_11320 | SAMN05444679_10752 | Hippurate hydrolase. | Glutamate synthase (NADH) large subunit. | 0.796 |
SDD72114.1 | SDD72078.1 | SAMN05444679_11320 | SAMN05444679_11319 | Hippurate hydrolase. | Hypothetical protein. | 0.545 |
SDD72114.1 | SDD72156.1 | SAMN05444679_11320 | SAMN05444679_11321 | Hippurate hydrolase. | Tripartite-type tricarboxylate transporter, receptor component TctC. | 0.660 |
SDD72114.1 | dapD | SAMN05444679_11320 | SAMN05444679_110137 | Hippurate hydrolase. | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family. | 0.480 |
SDD72114.1 | dapF | SAMN05444679_11320 | SAMN05444679_104189 | Hippurate hydrolase. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.527 |
SDD72156.1 | SDD72078.1 | SAMN05444679_11321 | SAMN05444679_11319 | Tripartite-type tricarboxylate transporter, receptor component TctC. | Hypothetical protein. | 0.466 |
SDD72156.1 | SDD72114.1 | SAMN05444679_11321 | SAMN05444679_11320 | Tripartite-type tricarboxylate transporter, receptor component TctC. | Hippurate hydrolase. | 0.660 |
dapD | SDC95022.1 | SAMN05444679_110137 | SAMN05444679_106205 | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family. | Hippurate hydrolase. | 0.480 |
dapD | SDD72114.1 | SAMN05444679_110137 | SAMN05444679_11320 | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family. | Hippurate hydrolase. | 0.480 |
dapD | dapF | SAMN05444679_110137 | SAMN05444679_104189 | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.453 |
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