Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDC81110.1 | SDD78912.1 | SAMN05444679_105230 | SAMN05444679_113215 | Fumarylacetoacetate hydrolase. | Homogentisate 1,2-dioxygenase. | 0.744 |
SDC81110.1 | SDE15188.1 | SAMN05444679_105230 | SAMN05444679_1184 | Fumarylacetoacetate hydrolase. | Phenylalanine 4-hydroxylase. | 0.591 |
SDC81110.1 | SDE15254.1 | SAMN05444679_105230 | SAMN05444679_1186 | Fumarylacetoacetate hydrolase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.689 |
SDC81110.1 | SDE34492.1 | SAMN05444679_105230 | SAMN05444679_1211 | Fumarylacetoacetate hydrolase. | Fumarylacetoacetase. | 0.724 |
SDC81110.1 | SDE63397.1 | SAMN05444679_105230 | SAMN05444679_12698 | Fumarylacetoacetate hydrolase. | Fumarylacetoacetase. | 0.723 |
SDC81110.1 | SDE90879.1 | SAMN05444679_105230 | SAMN05444679_13812 | Fumarylacetoacetate hydrolase. | Maleylacetoacetate isomerase. | 0.895 |
SDC81110.1 | SDF00329.1 | SAMN05444679_105230 | SAMN05444679_1592 | Fumarylacetoacetate hydrolase. | Fumarylacetoacetase. | 0.726 |
SDD56836.1 | SDD78912.1 | SAMN05444679_111208 | SAMN05444679_113215 | Protein of unknown function. | Homogentisate 1,2-dioxygenase. | 0.809 |
SDD56836.1 | SDE15188.1 | SAMN05444679_111208 | SAMN05444679_1184 | Protein of unknown function. | Phenylalanine 4-hydroxylase. | 0.462 |
SDD78871.1 | SDD78912.1 | SAMN05444679_113214 | SAMN05444679_113215 | Tripartite-type tricarboxylate transporter, receptor component TctC. | Homogentisate 1,2-dioxygenase. | 0.757 |
SDD78912.1 | SDC81110.1 | SAMN05444679_113215 | SAMN05444679_105230 | Homogentisate 1,2-dioxygenase. | Fumarylacetoacetate hydrolase. | 0.744 |
SDD78912.1 | SDD56836.1 | SAMN05444679_113215 | SAMN05444679_111208 | Homogentisate 1,2-dioxygenase. | Protein of unknown function. | 0.809 |
SDD78912.1 | SDD78871.1 | SAMN05444679_113215 | SAMN05444679_113214 | Homogentisate 1,2-dioxygenase. | Tripartite-type tricarboxylate transporter, receptor component TctC. | 0.757 |
SDD78912.1 | SDD94715.1 | SAMN05444679_113215 | SAMN05444679_115122 | Homogentisate 1,2-dioxygenase. | Protein of unknown function. | 0.809 |
SDD78912.1 | SDE15188.1 | SAMN05444679_113215 | SAMN05444679_1184 | Homogentisate 1,2-dioxygenase. | Phenylalanine 4-hydroxylase. | 0.799 |
SDD78912.1 | SDE15254.1 | SAMN05444679_113215 | SAMN05444679_1186 | Homogentisate 1,2-dioxygenase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.937 |
SDD78912.1 | SDE34492.1 | SAMN05444679_113215 | SAMN05444679_1211 | Homogentisate 1,2-dioxygenase. | Fumarylacetoacetase. | 0.743 |
SDD78912.1 | SDE63397.1 | SAMN05444679_113215 | SAMN05444679_12698 | Homogentisate 1,2-dioxygenase. | Fumarylacetoacetase. | 0.740 |
SDD78912.1 | SDE90879.1 | SAMN05444679_113215 | SAMN05444679_13812 | Homogentisate 1,2-dioxygenase. | Maleylacetoacetate isomerase. | 0.921 |
SDD78912.1 | SDF00329.1 | SAMN05444679_113215 | SAMN05444679_1592 | Homogentisate 1,2-dioxygenase. | Fumarylacetoacetase. | 0.744 |
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