STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD86344.1Zinc transporter, ZIP family. (301 aa)    
Predicted Functional Partners:
SDD45685.1
Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.741
SDC11684.1
Cytochrome c biogenesis protein CcdA.
  
 
 0.656
SDC08432.1
NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains.
   
    0.575
SDD86374.1
3-oxoacyl-[acyl-carrier protein] reductase.
       0.538
SDE94903.1
TPR repeat-containing protein.
    
 0.531
SDE37088.1
Superoxide dismutase, Fe-Mn family.
  
  
 0.519
SDE18005.1
Cation diffusion facilitator family transporter.
   
 0.463
SDC05139.1
Co/Zn/Cd efflux system component.
   
 0.448
SDD86408.1
CubicO group peptidase, beta-lactamase class C family.
       0.429
fumC
Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
    0.413
Your Current Organism:
Variovorax sp. CF079
NCBI taxonomy Id: 1882774
Other names: V. sp. CF079
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.