STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD94646.1geranyl-CoA carboxylase beta subunit. (539 aa)    
Predicted Functional Partners:
SDD94610.1
geranyl-CoA carboxylase alpha subunit.
 0.996
SDE16703.1
3-methylcrotonyl-CoA carboxylase alpha subunit.
 0.987
SDD56276.1
propionyl-CoA carboxylase alpha chain.
 
 0.982
SDE41001.1
Amino acid adenylation domain-containing protein.
  
 0.956
SDD94684.1
acyl-CoA dehydrogenase.
 
 
 0.908
SDD56382.1
methylmalonyl-CoA mutase.
 
 
 0.890
SDE16643.1
methylglutaconyl-CoA hydratase.
 
 
 0.887
SDD94715.1
Protein of unknown function.
 
 
 0.883
SDD72839.1
BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase.
  
 
 0.867
SDC94124.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
0.842
Your Current Organism:
Variovorax sp. CF079
NCBI taxonomy Id: 1882774
Other names: V. sp. CF079
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.