STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD91364.1Peptide/nickel transport system permease protein. (330 aa)    
Predicted Functional Partners:
SDD91284.1
Peptide/nickel transport system ATP-binding protein/dipeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.974
SDD91406.1
Peptide/nickel transport system substrate-binding protein.
 0.971
SDD91250.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.969
SDD42772.1
Peptide/nickel transport system permease protein.
 
 0.939
SDD93737.1
Peptide/nickel transport system permease protein.
 
 0.939
SDD91329.1
Peptide/nickel transport system permease protein/glutathione transport system permease protein.
 
0.932
SDC43712.1
Peptide/nickel transport system permease protein.
 
 0.930
SDC62663.1
Peptide/nickel transport system permease protein.
 
 0.930
SDC84154.1
Peptide/nickel transport system permease protein.
 
 0.930
SDD95823.1
Peptide/nickel transport system permease protein.
 
 0.930
Your Current Organism:
Variovorax sp. CF079
NCBI taxonomy Id: 1882774
Other names: V. sp. CF079
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.