STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE12983.1Hypothetical protein. (41 aa)    
Predicted Functional Partners:
SDD51733.1
Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
 
 0.996
SDE10800.1
Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
 
 0.996
SDC46670.1
Electron transfer flavoprotein beta subunit.
 
 0.992
SDF00755.1
Electron transfer flavoprotein beta subunit.
 
 0.991
SDC16236.1
Hypothetical protein.
  
 0.954
SDD50348.1
Hypothetical protein.
  
 0.954
SDE41001.1
Amino acid adenylation domain-containing protein.
  
 0.922
SDC52359.1
Acyl carrier protein.
  
 0.857
SDE12955.1
Hypothetical protein.
  
 0.855
SDD30130.1
Amino acid adenylation domain-containing protein.
  
 0.839
Your Current Organism:
Variovorax sp. CF079
NCBI taxonomy Id: 1882774
Other names: V. sp. CF079
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.