Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDC07550.1 | SDD03265.1 | SAMN05444679_101272 | SAMN05444679_10752 | glutaminyl-tRNA synthetase. | Glutamate synthase (NADH) large subunit. | 0.911 |
SDC07550.1 | SDE08216.1 | SAMN05444679_101272 | SAMN05444679_11721 | glutaminyl-tRNA synthetase. | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; Belongs to the amidase family. | 0.809 |
SDC07550.1 | aspS | SAMN05444679_101272 | SAMN05444679_107146 | glutaminyl-tRNA synthetase. | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.876 |
SDC07550.1 | gatB | SAMN05444679_101272 | SAMN05444679_10542 | glutaminyl-tRNA synthetase. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.993 |
SDC07550.1 | gatC | SAMN05444679_101272 | SAMN05444679_10540 | glutaminyl-tRNA synthetase. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.946 |
SDC30301.1 | SDD62651.1 | SAMN05444679_102207 | SAMN05444679_11264 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | phenylacetate-CoA ligase. | 0.936 |
SDC30301.1 | SDE08216.1 | SAMN05444679_102207 | SAMN05444679_11721 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; Belongs to the amidase family. | 0.916 |
SDC83421.1 | SDD03265.1 | SAMN05444679_105305 | SAMN05444679_10752 | benzoate-CoA ligase. | Glutamate synthase (NADH) large subunit. | 0.527 |
SDC83421.1 | SDE08216.1 | SAMN05444679_105305 | SAMN05444679_11721 | benzoate-CoA ligase. | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; Belongs to the amidase family. | 0.918 |
SDD03265.1 | SDC07550.1 | SAMN05444679_10752 | SAMN05444679_101272 | Glutamate synthase (NADH) large subunit. | glutaminyl-tRNA synthetase. | 0.911 |
SDD03265.1 | SDC83421.1 | SAMN05444679_10752 | SAMN05444679_105305 | Glutamate synthase (NADH) large subunit. | benzoate-CoA ligase. | 0.527 |
SDD03265.1 | SDE08216.1 | SAMN05444679_10752 | SAMN05444679_11721 | Glutamate synthase (NADH) large subunit. | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; Belongs to the amidase family. | 0.833 |
SDD03265.1 | gatB | SAMN05444679_10752 | SAMN05444679_10542 | Glutamate synthase (NADH) large subunit. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.924 |
SDD03265.1 | gatC | SAMN05444679_10752 | SAMN05444679_10540 | Glutamate synthase (NADH) large subunit. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.919 |
SDD62651.1 | SDC30301.1 | SAMN05444679_11264 | SAMN05444679_102207 | phenylacetate-CoA ligase. | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.936 |
SDD62651.1 | SDE08216.1 | SAMN05444679_11264 | SAMN05444679_11721 | phenylacetate-CoA ligase. | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; Belongs to the amidase family. | 0.916 |
SDE08216.1 | SDC07550.1 | SAMN05444679_11721 | SAMN05444679_101272 | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; Belongs to the amidase family. | glutaminyl-tRNA synthetase. | 0.809 |
SDE08216.1 | SDC30301.1 | SAMN05444679_11721 | SAMN05444679_102207 | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; Belongs to the amidase family. | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.916 |
SDE08216.1 | SDC83421.1 | SAMN05444679_11721 | SAMN05444679_105305 | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; Belongs to the amidase family. | benzoate-CoA ligase. | 0.918 |
SDE08216.1 | SDD03265.1 | SAMN05444679_11721 | SAMN05444679_10752 | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; Belongs to the amidase family. | Glutamate synthase (NADH) large subunit. | 0.833 |
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