STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE30772.1Outer membrane transport energization protein ExbD. (137 aa)    
Predicted Functional Partners:
SDE30742.1
Outer membrane transport energization protein ExbB.
 
 0.996
SDE35889.1
Biopolymer transport protein ExbB.
 
 0.981
tolQ
Cell division and transport-associated protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 0.976
SDE30713.1
Outer membrane transport energization protein TonB.
 
 0.971
SDE00794.1
Cell division and transport-associated protein TolA.
  
 0.942
SDD45750.1
Biopolymer transport protein ExbB.
 
 0.941
SDC27623.1
Hypothetical protein.
  
 0.884
SDC34324.1
Hypothetical protein.
  
 0.884
SDC65213.1
Protein TonB.
  
 0.884
SDD54698.1
Hypothetical protein.
  
 0.878
Your Current Organism:
Variovorax sp. CF079
NCBI taxonomy Id: 1882774
Other names: V. sp. CF079
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.