Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDC10618.1 | SDC52359.1 | SAMN05444679_101344 | SAMN05444679_103280 | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | Acyl carrier protein. | 0.972 |
SDC10618.1 | SDD04520.1 | SAMN05444679_101344 | SAMN05444679_10788 | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | Ubiquinol-cytochrome c reductase cytochrome c1 subunit. | 0.995 |
SDC10618.1 | SDD08358.1 | SAMN05444679_101344 | SAMN05444679_107204 | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | NAD-dependent formate dehydrogenase flavoprotein subunit. | 0.993 |
SDC10618.1 | SDD30130.1 | SAMN05444679_101344 | SAMN05444679_109142 | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | Amino acid adenylation domain-containing protein. | 0.973 |
SDC10618.1 | SDD75973.1 | SAMN05444679_101344 | SAMN05444679_113129 | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | Formate dehydrogenase gamma subunit. | 0.999 |
SDC10618.1 | SDE03208.1 | SAMN05444679_101344 | SAMN05444679_116110 | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.781 |
SDC10618.1 | SDE29496.1 | SAMN05444679_101344 | SAMN05444679_12069 | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | Acetyl esterase/lipase. | 0.726 |
SDC10618.1 | SDE41001.1 | SAMN05444679_101344 | SAMN05444679_12211 | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | Amino acid adenylation domain-containing protein. | 0.973 |
SDC52359.1 | SDC10618.1 | SAMN05444679_103280 | SAMN05444679_101344 | Acyl carrier protein. | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.972 |
SDC52359.1 | SDD04520.1 | SAMN05444679_103280 | SAMN05444679_10788 | Acyl carrier protein. | Ubiquinol-cytochrome c reductase cytochrome c1 subunit. | 0.988 |
SDC52359.1 | SDD08358.1 | SAMN05444679_103280 | SAMN05444679_107204 | Acyl carrier protein. | NAD-dependent formate dehydrogenase flavoprotein subunit. | 0.999 |
SDC52359.1 | SDD30130.1 | SAMN05444679_103280 | SAMN05444679_109142 | Acyl carrier protein. | Amino acid adenylation domain-containing protein. | 0.999 |
SDC52359.1 | SDD75973.1 | SAMN05444679_103280 | SAMN05444679_113129 | Acyl carrier protein. | Formate dehydrogenase gamma subunit. | 0.986 |
SDC52359.1 | SDE29496.1 | SAMN05444679_103280 | SAMN05444679_12069 | Acyl carrier protein. | Acetyl esterase/lipase. | 0.954 |
SDC52359.1 | SDE29561.1 | SAMN05444679_103280 | SAMN05444679_12071 | Acyl carrier protein. | Hypothetical protein. | 0.590 |
SDC52359.1 | SDE41001.1 | SAMN05444679_103280 | SAMN05444679_12211 | Acyl carrier protein. | Amino acid adenylation domain-containing protein. | 0.999 |
SDD04520.1 | SDC10618.1 | SAMN05444679_10788 | SAMN05444679_101344 | Ubiquinol-cytochrome c reductase cytochrome c1 subunit. | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.995 |
SDD04520.1 | SDC52359.1 | SAMN05444679_10788 | SAMN05444679_103280 | Ubiquinol-cytochrome c reductase cytochrome c1 subunit. | Acyl carrier protein. | 0.988 |
SDD04520.1 | SDD08358.1 | SAMN05444679_10788 | SAMN05444679_107204 | Ubiquinol-cytochrome c reductase cytochrome c1 subunit. | NAD-dependent formate dehydrogenase flavoprotein subunit. | 0.999 |
SDD04520.1 | SDD30130.1 | SAMN05444679_10788 | SAMN05444679_109142 | Ubiquinol-cytochrome c reductase cytochrome c1 subunit. | Amino acid adenylation domain-containing protein. | 0.988 |
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