STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE36411.1acyl-CoA dehydrogenase. (387 aa)    
Predicted Functional Partners:
SDE36471.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.960
SDE41001.1
Amino acid adenylation domain-containing protein.
  
 
 0.946
SDE36440.1
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase.
  
  0.923
SDC48283.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.911
SDC61256.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.906
SDD82585.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.895
SDE82250.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
   
  0.823
SDC62090.1
3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.815
SDE16643.1
methylglutaconyl-CoA hydratase.
   
  0.794
SDC46629.1
Electron transfer flavoprotein alpha subunit apoprotein.
 0.791
Your Current Organism:
Variovorax sp. CF079
NCBI taxonomy Id: 1882774
Other names: V. sp. CF079
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