STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE43648.1Amino acid ABC transporter substrate-binding protein, PAAT family. (296 aa)    
Predicted Functional Partners:
SDE43618.1
Cytochrome C oxidase, cbb3-type, subunit III.
 
  
 0.963
SDE43589.1
PQQ-dependent dehydrogenase, methanol/ethanol family.
 
 
 0.951
SDE43684.1
Hypothetical protein.
 
    0.929
SDE43925.1
mxaL protein.
 
  
  0.927
SDE43711.1
Hypothetical protein.
 
    0.919
SDE43841.1
mxaA protein.
 
  
  0.912
SDE43760.1
Polyketide cyclase / dehydrase and lipid transport.
 
  
  0.910
SDE43866.1
mxaC protein.
 
  
  0.908
SDE43895.1
mxaK protein.
 
  
  0.903
SDE43732.1
40-residue YVTN family beta-propeller repeat-containing protein.
 
  
  0.866
Your Current Organism:
Variovorax sp. CF079
NCBI taxonomy Id: 1882774
Other names: V. sp. CF079
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.