Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE41001.1 | SDE53608.1 | SAMN05444679_12211 | SAMN05444679_12498 | Amino acid adenylation domain-containing protein. | Nitroreductase. | 0.810 |
SDE41001.1 | SDE53670.1 | SAMN05444679_12211 | SAMN05444679_124100 | Amino acid adenylation domain-containing protein. | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | 0.870 |
SDE41001.1 | SDE53700.1 | SAMN05444679_12211 | SAMN05444679_124101 | Amino acid adenylation domain-containing protein. | Hemolysin III. | 0.484 |
SDE41001.1 | glpK | SAMN05444679_12211 | SAMN05444679_101468 | Amino acid adenylation domain-containing protein. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.473 |
SDE41001.1 | polA | SAMN05444679_12211 | SAMN05444679_10876 | Amino acid adenylation domain-containing protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.858 |
SDE53608.1 | SDE41001.1 | SAMN05444679_12498 | SAMN05444679_12211 | Nitroreductase. | Amino acid adenylation domain-containing protein. | 0.810 |
SDE53608.1 | SDE53636.1 | SAMN05444679_12498 | SAMN05444679_12499 | Nitroreductase. | Hemerythrin-like domain-containing protein. | 0.811 |
SDE53608.1 | SDE53670.1 | SAMN05444679_12498 | SAMN05444679_124100 | Nitroreductase. | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | 0.459 |
SDE53608.1 | SDE53700.1 | SAMN05444679_12498 | SAMN05444679_124101 | Nitroreductase. | Hemolysin III. | 0.450 |
SDE53636.1 | SDE53608.1 | SAMN05444679_12499 | SAMN05444679_12498 | Hemerythrin-like domain-containing protein. | Nitroreductase. | 0.811 |
SDE53636.1 | SDE53670.1 | SAMN05444679_12499 | SAMN05444679_124100 | Hemerythrin-like domain-containing protein. | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | 0.449 |
SDE53636.1 | SDE53700.1 | SAMN05444679_12499 | SAMN05444679_124101 | Hemerythrin-like domain-containing protein. | Hemolysin III. | 0.436 |
SDE53636.1 | SDE53733.1 | SAMN05444679_12499 | SAMN05444679_124102 | Hemerythrin-like domain-containing protein. | Uncharacterized conserved protein, DUF2249 family. | 0.445 |
SDE53670.1 | SDE41001.1 | SAMN05444679_124100 | SAMN05444679_12211 | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | Amino acid adenylation domain-containing protein. | 0.870 |
SDE53670.1 | SDE53608.1 | SAMN05444679_124100 | SAMN05444679_12498 | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | Nitroreductase. | 0.459 |
SDE53670.1 | SDE53636.1 | SAMN05444679_124100 | SAMN05444679_12499 | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | Hemerythrin-like domain-containing protein. | 0.449 |
SDE53670.1 | SDE53700.1 | SAMN05444679_124100 | SAMN05444679_124101 | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | Hemolysin III. | 0.749 |
SDE53670.1 | glpK | SAMN05444679_124100 | SAMN05444679_101468 | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.429 |
SDE53700.1 | SDE41001.1 | SAMN05444679_124101 | SAMN05444679_12211 | Hemolysin III. | Amino acid adenylation domain-containing protein. | 0.484 |
SDE53700.1 | SDE53608.1 | SAMN05444679_124101 | SAMN05444679_12498 | Hemolysin III. | Nitroreductase. | 0.450 |
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