STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE53244.1Respiratory nitrate reductase gamma subunit. (244 aa)    
Predicted Functional Partners:
SDE53267.1
Respiratory nitrate reductase chaperone NarJ.
 
 
 0.999
SDE53294.1
Respiratory nitrate reductase beta subunit.
 
 0.999
SDE53325.1
Respiratory nitrate reductase alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.999
SDE53356.1
MFS transporter, NNP family, nitrate/nitrite transporter.
 
 
 0.992
SDE53381.1
MFS transporter, NNP family, nitrate/nitrite transporter.
 
 
 0.992
SDC09672.1
MFS transporter, NNP family, nitrate/nitrite transporter.
 
 
 0.968
SDC09487.1
Assimilatory nitrite reductase (NAD(P)H) small subunit.
  
 
 0.941
SDE53124.1
Nitronate monooxygenase.
    
  0.928
SDE53208.1
Peptidyl-prolyl cis-trans isomerase C.
 
  
 0.926
SDC09437.1
Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
     
 0.876
Your Current Organism:
Variovorax sp. CF079
NCBI taxonomy Id: 1882774
Other names: V. sp. CF079
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