STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE56402.1Putative addiction module antidote protein, CC2985 family. (88 aa)    
Predicted Functional Partners:
SDD40659.1
Addiction module toxin, RelE/StbE family.
 
 
 0.923
SDE57067.1
Plasmid stabilization system protein ParE.
 
 
 0.907
SDD14347.1
Toxin ParE1/3/4.
  
 
 0.886
SDD72046.1
Hypothetical protein.
  
 
 0.816
SDE56654.1
mRNA interferase MazF; Toxic component of a type II toxin-antitoxin (TA) system.
 
 
 
 0.661
SDC60418.1
mRNA interferase MazF.
   
 
 0.618
SDE56374.1
Sigma-70 region 2; Belongs to the sigma-70 factor family.
       0.536
SDE52476.1
NAD-dependent deacetylase.
   
    0.487
SDE19302.1
Bifunctional NMN adenylyltransferase/nudix hydrolase.
   
    0.467
SDD40697.1
Hypothetical protein.
  
   
 0.449
Your Current Organism:
Variovorax sp. CF079
NCBI taxonomy Id: 1882774
Other names: V. sp. CF079
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.