STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE62123.13-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. (297 aa)    
Predicted Functional Partners:
SDE09650.1
Enoyl-CoA hydratase/carnithine racemase.
 
  0.980
SDE09702.1
Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase.
 
 
 0.869
SDE62092.1
Sulfoacetaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.839
SDC93114.1
3-hydroxyisobutyrate dehydrogenase/2-hydroxy-3-oxopropionate reductase.
  
  
 
0.815
SDD56276.1
propionyl-CoA carboxylase alpha chain.
  
 
 0.813
SDD55076.1
Methylmalonate-semialdehyde dehydrogenase [acylating].
 
 
 0.809
SDD86311.1
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
  
 
 0.796
SDD56309.1
propionyl-CoA carboxylase carboxyltransferase subunit.
  
 
  0.787
SDD54838.1
propionyl-CoA synthetase.
  
 
  0.786
acsA
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
  0.782
Your Current Organism:
Variovorax sp. CF079
NCBI taxonomy Id: 1882774
Other names: V. sp. CF079
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