node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE67471.1 | rplO | SAMN05444679_12785 | SAMN05444679_106242 | Elongation factor Tu GTP binding domain-containing protein. | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.987 |
SDE67471.1 | rplP | SAMN05444679_12785 | SAMN05444679_10612 | Elongation factor Tu GTP binding domain-containing protein. | LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.987 |
SDE67471.1 | rplV | SAMN05444679_12785 | SAMN05444679_10610 | Elongation factor Tu GTP binding domain-containing protein. | LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.987 |
SDE67471.1 | rpmJ | SAMN05444679_12785 | SAMN05444679_106245 | Elongation factor Tu GTP binding domain-containing protein. | LSU ribosomal protein L36P; Belongs to the bacterial ribosomal protein bL36 family. | 0.988 |
SDE67471.1 | rpsE | SAMN05444679_12785 | SAMN05444679_106240 | Elongation factor Tu GTP binding domain-containing protein. | SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.987 |
SDE67471.1 | rpsG | SAMN05444679_12785 | SAMN05444679_1053 | Elongation factor Tu GTP binding domain-containing protein. | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.987 |
SDE67471.1 | rpsJ | SAMN05444679_12785 | SAMN05444679_1062 | Elongation factor Tu GTP binding domain-containing protein. | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.987 |
SDE67471.1 | rpsK | SAMN05444679_12785 | SAMN05444679_106247 | Elongation factor Tu GTP binding domain-containing protein. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.987 |
SDE67471.1 | rpsL | SAMN05444679_12785 | SAMN05444679_1054 | Elongation factor Tu GTP binding domain-containing protein. | SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.987 |
SDE67471.1 | tsf | SAMN05444679_12785 | SAMN05444679_116179 | Elongation factor Tu GTP binding domain-containing protein. | Translation elongation factor Ts (EF-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.996 |
rplO | SDE67471.1 | SAMN05444679_106242 | SAMN05444679_12785 | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | Elongation factor Tu GTP binding domain-containing protein. | 0.987 |
rplO | rplP | SAMN05444679_106242 | SAMN05444679_10612 | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.999 |
rplO | rplV | SAMN05444679_106242 | SAMN05444679_10610 | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.999 |
rplO | rpmJ | SAMN05444679_106242 | SAMN05444679_106245 | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | LSU ribosomal protein L36P; Belongs to the bacterial ribosomal protein bL36 family. | 0.999 |
rplO | rpsE | SAMN05444679_106242 | SAMN05444679_106240 | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.999 |
rplO | rpsG | SAMN05444679_106242 | SAMN05444679_1053 | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.999 |
rplO | rpsJ | SAMN05444679_106242 | SAMN05444679_1062 | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.998 |
rplO | rpsK | SAMN05444679_106242 | SAMN05444679_106247 | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.999 |
rplO | rpsL | SAMN05444679_106242 | SAMN05444679_1054 | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.999 |
rplO | tsf | SAMN05444679_106242 | SAMN05444679_116179 | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | Translation elongation factor Ts (EF-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.966 |