Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDC52359.1 | SDD30130.1 | SAMN05444679_103280 | SAMN05444679_109142 | Acyl carrier protein. | Amino acid adenylation domain-containing protein. | 0.999 |
SDC52359.1 | SDD61014.1 | SAMN05444679_103280 | SAMN05444679_11219 | Acyl carrier protein. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.463 |
SDC52359.1 | SDE34525.1 | SAMN05444679_103280 | SAMN05444679_1212 | Acyl carrier protein. | Response regulator receiver domain-containing protein. | 0.940 |
SDC52359.1 | SDE37088.1 | SAMN05444679_103280 | SAMN05444679_12181 | Acyl carrier protein. | Superoxide dismutase, Fe-Mn family. | 0.992 |
SDC52359.1 | SDE41001.1 | SAMN05444679_103280 | SAMN05444679_12211 | Acyl carrier protein. | Amino acid adenylation domain-containing protein. | 0.999 |
SDC52359.1 | SDE68772.1 | SAMN05444679_103280 | SAMN05444679_12812 | Acyl carrier protein. | Transcriptional regulator, ArsR family. | 0.912 |
SDC52359.1 | SDE68835.1 | SAMN05444679_103280 | SAMN05444679_12814 | Acyl carrier protein. | Sugar phosphate permease. | 0.571 |
SDC52359.1 | ybeY | SAMN05444679_103280 | SAMN05444679_11892 | Acyl carrier protein. | Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.971 |
SDD08838.1 | SDE34525.1 | SAMN05444679_107220 | SAMN05444679_1212 | Cystathionine beta-synthase. | Response regulator receiver domain-containing protein. | 0.494 |
SDD08838.1 | SDE37088.1 | SAMN05444679_107220 | SAMN05444679_12181 | Cystathionine beta-synthase. | Superoxide dismutase, Fe-Mn family. | 0.569 |
SDD08838.1 | SDE41001.1 | SAMN05444679_107220 | SAMN05444679_12211 | Cystathionine beta-synthase. | Amino acid adenylation domain-containing protein. | 0.685 |
SDD08838.1 | SDE68772.1 | SAMN05444679_107220 | SAMN05444679_12812 | Cystathionine beta-synthase. | Transcriptional regulator, ArsR family. | 0.745 |
SDD30130.1 | SDC52359.1 | SAMN05444679_109142 | SAMN05444679_103280 | Amino acid adenylation domain-containing protein. | Acyl carrier protein. | 0.999 |
SDD30130.1 | SDD61014.1 | SAMN05444679_109142 | SAMN05444679_11219 | Amino acid adenylation domain-containing protein. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.462 |
SDD30130.1 | SDE34525.1 | SAMN05444679_109142 | SAMN05444679_1212 | Amino acid adenylation domain-containing protein. | Response regulator receiver domain-containing protein. | 0.916 |
SDD30130.1 | SDE37088.1 | SAMN05444679_109142 | SAMN05444679_12181 | Amino acid adenylation domain-containing protein. | Superoxide dismutase, Fe-Mn family. | 0.990 |
SDD30130.1 | SDE41001.1 | SAMN05444679_109142 | SAMN05444679_12211 | Amino acid adenylation domain-containing protein. | Amino acid adenylation domain-containing protein. | 0.999 |
SDD30130.1 | SDE68772.1 | SAMN05444679_109142 | SAMN05444679_12812 | Amino acid adenylation domain-containing protein. | Transcriptional regulator, ArsR family. | 0.891 |
SDD30130.1 | SDE68803.1 | SAMN05444679_109142 | SAMN05444679_12813 | Amino acid adenylation domain-containing protein. | Glyoxylase, beta-lactamase superfamily II. | 0.427 |
SDD30130.1 | ybeY | SAMN05444679_109142 | SAMN05444679_11892 | Amino acid adenylation domain-containing protein. | Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.958 |
page 1 of 4