STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE70128.1Hypothetical protein. (618 aa)    
Predicted Functional Partners:
SDE70155.1
Two component transcriptional regulator, LuxR family.
 
 0.974
SDE34525.1
Response regulator receiver domain-containing protein.
  
 0.916
SDE96107.1
Two component transcriptional regulator, LuxR family.
 
 0.908
SDE37916.1
Two component transcriptional regulator, LuxR family.
 
 0.907
SDD57057.1
Response regulator receiver domain-containing protein.
  
 0.901
SDD14440.1
Two component transcriptional regulator, LuxR family.
 
 0.899
SDE42642.1
Two component transcriptional regulator, LuxR family.
 
 0.898
SDD06897.1
Two component transcriptional regulator, LuxR family.
 
 0.895
SDD10254.1
Two component transcriptional regulator, LuxR family.
 
 0.895
SDD71887.1
Two component transcriptional regulator, LuxR family.
 
 0.895
Your Current Organism:
Variovorax sp. CF079
NCBI taxonomy Id: 1882774
Other names: V. sp. CF079
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.