STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE72895.12-hydroxymuconate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (489 aa)    
Predicted Functional Partners:
SDE72788.1
Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.
 
  
 0.907
SDE41001.1
Amino acid adenylation domain-containing protein.
  
 0.887
SDE72763.1
4-hydroxy-2-oxovalerate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family.
 
 
 0.885
SDE72820.1
4-oxalocrotonate tautomerase.
 
  
 0.880
SDE72941.1
2,3-dihydroxy-p-cumate/2,3-dihydroxybenzoate 3,4-dioxygenase.
 
  
 0.871
SDE72918.1
HCOMODA/2-hydroxy-3-carboxy-muconic semialdehyde decarboxylase.
 
  
  0.861
SDE72849.1
2-oxo-3-hexenedioate decarboxylase.
 
    0.860
SDE72873.1
2-keto-4-pentenoate hydratase.
 
  
 0.854
SDD03265.1
Glutamate synthase (NADH) large subunit.
  
 
 0.833
SDD51581.1
Aldehyde dehydrogenase family protein.
  
     0.764
Your Current Organism:
Variovorax sp. CF079
NCBI taxonomy Id: 1882774
Other names: V. sp. CF079
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