STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE77733.1Hypothetical protein. (366 aa)    
Predicted Functional Partners:
SDE77711.1
Cardiolipin synthase.
       0.773
SDE77679.1
Hypothetical protein.
       0.671
SDD29251.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
  
 0.647
SDD52758.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
  
 0.647
SDE75592.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
  
 0.647
SDC07731.1
Hypothetical protein.
  
     0.525
rep
ATP-dependent DNA helicase Rep; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction.
       0.521
SDE77620.1
Hypothetical protein.
       0.501
SDE77588.1
Phospholipase A1; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family.
       0.490
SDE77776.1
Hypothetical protein.
       0.472
Your Current Organism:
Variovorax sp. CF079
NCBI taxonomy Id: 1882774
Other names: V. sp. CF079
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.