STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE80346.1Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (262 aa)    
Predicted Functional Partners:
SDD64492.1
3-hydroxybutyryl-CoA dehydrogenase.
 0.949
SDE41001.1
Amino acid adenylation domain-containing protein.
  
 0.935
SDE52796.1
PAS domain S-box-containing protein.
   
  0.929
SDC26558.1
PAS domain S-box-containing protein.
   
 0.924
SDD21749.1
PAS domain S-box-containing protein.
   
 0.922
SDE47006.1
PAS domain S-box-containing protein.
   
 0.922
SDC29151.1
Hypothetical protein.
   
  0.882
SDD10326.1
Signal transduction histidine kinase.
   
  0.882
SDD39066.1
Signal transduction histidine kinase.
   
  0.882
SDD94251.1
Signal transduction histidine kinase.
   
  0.882
Your Current Organism:
Variovorax sp. CF079
NCBI taxonomy Id: 1882774
Other names: V. sp. CF079
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.