STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE94314.1Hypothetical protein. (592 aa)    
Predicted Functional Partners:
SDE41001.1
Amino acid adenylation domain-containing protein.
  
 
 0.946
SDE94339.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.940
SDE94362.1
Long-chain acyl-CoA synthetase.
  
 0.938
SDC61256.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.931
SDC48283.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.909
SDD82585.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.909
SDE94288.1
Long-chain acyl-CoA synthetase.
  
 
  0.894
SDE16643.1
methylglutaconyl-CoA hydratase.
   
  0.829
SDD97248.1
Vanillin synthase /trans-feruloyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
  0.821
SDC13520.1
acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.820
Your Current Organism:
Variovorax sp. CF079
NCBI taxonomy Id: 1882774
Other names: V. sp. CF079
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