Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE79442.1 | SDE98182.1 | SAMN05444679_1324 | SAMN05444679_1501 | Glycine/D-amino acid oxidase. | 2-haloacid dehalogenase. | 0.770 |
SDE79442.1 | SDE98240.1 | SAMN05444679_1324 | SAMN05444679_1503 | Glycine/D-amino acid oxidase. | Peptide/nickel transport system permease protein. | 0.614 |
SDE79442.1 | SDE98270.1 | SAMN05444679_1324 | SAMN05444679_1504 | Glycine/D-amino acid oxidase. | Peptide/nickel transport system permease protein. | 0.635 |
SDE79442.1 | SDE98300.1 | SAMN05444679_1324 | SAMN05444679_1505 | Glycine/D-amino acid oxidase. | Peptide/nickel transport system ATP-binding protein. | 0.613 |
SDE79442.1 | SDE98743.1 | SAMN05444679_1324 | SAMN05444679_1521 | Glycine/D-amino acid oxidase. | Hypothetical protein. | 0.770 |
SDE79442.1 | SDE98794.1 | SAMN05444679_1324 | SAMN05444679_1523 | Glycine/D-amino acid oxidase. | Acetyltransferase (GNAT) domain-containing protein. | 0.761 |
SDE79442.1 | SDE99265.1 | SAMN05444679_1324 | SAMN05444679_1541 | Glycine/D-amino acid oxidase. | Hypothetical protein. | 0.770 |
SDE79442.1 | SDE99325.1 | SAMN05444679_1324 | SAMN05444679_1543 | Glycine/D-amino acid oxidase. | Acetyltransferase (GNAT) domain-containing protein. | 0.762 |
SDE79442.1 | SDE99960.1 | SAMN05444679_1324 | SAMN05444679_1571 | Glycine/D-amino acid oxidase. | Hypothetical protein. | 0.589 |
SDE79442.1 | SDE99994.1 | SAMN05444679_1324 | SAMN05444679_1572 | Glycine/D-amino acid oxidase. | Peptide/nickel transport system substrate-binding protein. | 0.758 |
SDE98182.1 | SDE79442.1 | SAMN05444679_1501 | SAMN05444679_1324 | 2-haloacid dehalogenase. | Glycine/D-amino acid oxidase. | 0.770 |
SDE98182.1 | SDE98240.1 | SAMN05444679_1501 | SAMN05444679_1503 | 2-haloacid dehalogenase. | Peptide/nickel transport system permease protein. | 0.784 |
SDE98182.1 | SDE98270.1 | SAMN05444679_1501 | SAMN05444679_1504 | 2-haloacid dehalogenase. | Peptide/nickel transport system permease protein. | 0.781 |
SDE98182.1 | SDE98300.1 | SAMN05444679_1501 | SAMN05444679_1505 | 2-haloacid dehalogenase. | Peptide/nickel transport system ATP-binding protein. | 0.767 |
SDE98182.1 | SDE98794.1 | SAMN05444679_1501 | SAMN05444679_1523 | 2-haloacid dehalogenase. | Acetyltransferase (GNAT) domain-containing protein. | 0.773 |
SDE98182.1 | SDE99325.1 | SAMN05444679_1501 | SAMN05444679_1543 | 2-haloacid dehalogenase. | Acetyltransferase (GNAT) domain-containing protein. | 0.774 |
SDE98182.1 | SDE99960.1 | SAMN05444679_1501 | SAMN05444679_1571 | 2-haloacid dehalogenase. | Hypothetical protein. | 0.600 |
SDE98182.1 | SDE99994.1 | SAMN05444679_1501 | SAMN05444679_1572 | 2-haloacid dehalogenase. | Peptide/nickel transport system substrate-binding protein. | 0.767 |
SDE98240.1 | SDE79442.1 | SAMN05444679_1503 | SAMN05444679_1324 | Peptide/nickel transport system permease protein. | Glycine/D-amino acid oxidase. | 0.614 |
SDE98240.1 | SDE98182.1 | SAMN05444679_1503 | SAMN05444679_1501 | Peptide/nickel transport system permease protein. | 2-haloacid dehalogenase. | 0.784 |
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