STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIO25335.1Protein TonB. (305 aa)    
Predicted Functional Partners:
SIO25386.1
Outer membrane transport energization protein ExbD.
 
 0.991
SIO25361.1
Outer membrane transport energization protein ExbD.
 
 0.986
SIO25413.1
Biopolymer transport protein ExbB.
 
 0.986
SIO56034.1
Hemoglobin/transferrin/lactoferrin receptor protein.
  
 0.979
SIO40673.1
Vitamin B12 transporter.
 
 
 0.964
SIO55975.1
Biopolymer transport protein ExbD.
 
 0.963
SIO55986.1
Outer membrane transport energization protein ExbB.
 
 0.942
SIO55966.1
Outer membrane transport energization protein ExbD.
 
 0.941
SIO42053.1
Hypothetical protein.
    
   0.894
SIO25489.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.866
Your Current Organism:
Rhodovulum sp. ES010
NCBI taxonomy Id: 1882821
Other names: R. sp. ES.010, Rhodovulum sp. ES.010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.