STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIO17463.1Predicted transcriptional regulator YheO, contains PAS and DNA-binding HTH domains. (240 aa)    
Predicted Functional Partners:
SIO17418.1
tRNA 2-thiouridine synthesizing protein C; Belongs to the DsrF/TusC family.
 
    0.827
SIO17442.1
tRNA 2-thiouridine synthesizing protein D.
  
    0.811
SIO17397.1
tRNA 2-thiouridine synthesizing protein B.
     
 0.789
SIN96675.1
Hypothetical protein; Belongs to the UPF0304 family.
  
     0.720
SIO24534.1
Protein of unknown function.
  
     0.667
SIN93875.1
Hypothetical protein.
  
     0.640
SIN94304.1
Protein of unknown function.
  
     0.608
SIO27993.1
Endoribonuclease L-PSP.
 
  
 0.593
SIO21013.1
Universal stress protein B.
  
     0.588
SIN90425.1
Hypothetical protein; Belongs to the UPF0267 family.
  
     0.585
Your Current Organism:
Salinivibrio sp. ES052
NCBI taxonomy Id: 1882823
Other names: S. sp. ES.052, Salinivibrio sp. ES.052
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.