STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL88454.1Hypothetical protein. (107 aa)    
Predicted Functional Partners:
SFL88249.1
Cupin domain-containing protein.
 
    0.949
SFL88479.1
Hypothetical protein.
  
    0.868
SFL88388.1
Catechol-2,3-dioxygenase.
 
    0.851
SFL88500.1
Phenylpropionate dioxygenase, large terminal subunit.
 
    0.835
SFN27020.1
Translation elongation factor 2 (EF-2/EF-G).
    
  0.786
fusA
Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...]
    
  0.786
SFL88330.1
Acetolactate synthase-1/2/3 large subunit; Belongs to the TPP enzyme family.
 
  
  0.775
nadX
Aspartate dehydrogenase; Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate.
 
    0.700
SFL88366.1
Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
  0.700
SFL88310.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
     0.684
Your Current Organism:
Variovorax sp. OV329
NCBI taxonomy Id: 1882825
Other names: V. sp. OV329
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.