Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFM34019.1 | SFM53157.1 | SAMN05444747_104378 | SAMN05444747_10689 | Homogentisate 1,2-dioxygenase. | Glutathione S-transferase. | 0.409 |
SFM34019.1 | SFM77838.1 | SAMN05444747_104378 | SAMN05444747_108249 | Homogentisate 1,2-dioxygenase. | Glutathione S-transferase; Belongs to the GST superfamily. | 0.667 |
SFM34019.1 | SFM77858.1 | SAMN05444747_104378 | SAMN05444747_108250 | Homogentisate 1,2-dioxygenase. | Glutathione S-transferase. | 0.409 |
SFM34019.1 | SFM93942.1 | SAMN05444747_104378 | SAMN05444747_111137 | Homogentisate 1,2-dioxygenase. | Glutathione S-transferase; Belongs to the GST superfamily. | 0.638 |
SFM34019.1 | SFM94177.1 | SAMN05444747_104378 | SAMN05444747_111148 | Homogentisate 1,2-dioxygenase. | Glutathione S-transferase. | 0.587 |
SFM53157.1 | SFM34019.1 | SAMN05444747_10689 | SAMN05444747_104378 | Glutathione S-transferase. | Homogentisate 1,2-dioxygenase. | 0.409 |
SFM53157.1 | SFM77838.1 | SAMN05444747_10689 | SAMN05444747_108249 | Glutathione S-transferase. | Glutathione S-transferase; Belongs to the GST superfamily. | 0.638 |
SFM53157.1 | SFM93942.1 | SAMN05444747_10689 | SAMN05444747_111137 | Glutathione S-transferase. | Glutathione S-transferase; Belongs to the GST superfamily. | 0.427 |
SFM53157.1 | SFM94177.1 | SAMN05444747_10689 | SAMN05444747_111148 | Glutathione S-transferase. | Glutathione S-transferase. | 0.652 |
SFM53157.1 | lysS | SAMN05444747_10689 | SAMN05444747_102386 | Glutathione S-transferase. | lysyl-tRNA synthetase, class II; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.688 |
SFM53157.1 | rpoA | SAMN05444747_10689 | SAMN05444747_112176 | Glutathione S-transferase. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.757 |
SFM53157.1 | rpoB | SAMN05444747_10689 | SAMN05444747_13410 | Glutathione S-transferase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.658 |
SFM53157.1 | rpoC | SAMN05444747_10689 | SAMN05444747_1349 | Glutathione S-transferase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.653 |
SFM53157.1 | rpoZ | SAMN05444747_10689 | SAMN05444747_110160 | Glutathione S-transferase. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.618 |
SFM77838.1 | SFM34019.1 | SAMN05444747_108249 | SAMN05444747_104378 | Glutathione S-transferase; Belongs to the GST superfamily. | Homogentisate 1,2-dioxygenase. | 0.667 |
SFM77838.1 | SFM53157.1 | SAMN05444747_108249 | SAMN05444747_10689 | Glutathione S-transferase; Belongs to the GST superfamily. | Glutathione S-transferase. | 0.638 |
SFM77838.1 | SFM77858.1 | SAMN05444747_108249 | SAMN05444747_108250 | Glutathione S-transferase; Belongs to the GST superfamily. | Glutathione S-transferase. | 0.838 |
SFM77838.1 | SFM93942.1 | SAMN05444747_108249 | SAMN05444747_111137 | Glutathione S-transferase; Belongs to the GST superfamily. | Glutathione S-transferase; Belongs to the GST superfamily. | 0.608 |
SFM77838.1 | SFM94177.1 | SAMN05444747_108249 | SAMN05444747_111148 | Glutathione S-transferase; Belongs to the GST superfamily. | Glutathione S-transferase. | 0.602 |
SFM77838.1 | lysS | SAMN05444747_108249 | SAMN05444747_102386 | Glutathione S-transferase; Belongs to the GST superfamily. | lysyl-tRNA synthetase, class II; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.688 |
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