STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH43756.1Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid). (615 aa)    
Predicted Functional Partners:
SDH43822.1
UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase.
 
 
 0.962
SDH43685.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
 0.948
SDH43863.1
UDP-glucose 4-epimerase.
 
 
 0.931
SDH43725.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
 
 
 0.927
SDH43785.1
UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
 
 0.921
SDH43625.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
 
 
 0.909
SDI00090.1
Alkaline and neutral invertase.
  
 0.840
SDH43934.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
 
 0.829
SDH41858.1
Maltokinase.
   
 0.801
SDH43658.1
VanZ like family protein.
       0.773
Your Current Organism:
Variovorax sp. OV700
NCBI taxonomy Id: 1882826
Other names: V. sp. OV700
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.