STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI82811.1Transcriptional regulator, LuxR family. (319 aa)    
Predicted Functional Partners:
SDH73517.1
TOMM system kinase/cyclase fusion protein.
   
 
 0.636
SDI47524.1
Predicted ATPase.
   
 
 0.584
SDI28037.1
Transcriptional regulator, LuxR family.
 
 0.485
SDI82790.1
AraC-type DNA-binding protein.
       0.449
SDI06599.1
Response regulator receiver domain-containing protein.
 
 0.446
SDH86219.1
LuxR family transcriptional regulator, maltose regulon positive regulatory protein.
    
 0.444
SDH42520.1
NUDIX domain-containing protein.
    
   0.426
SDH71337.1
Glyoxylase, beta-lactamase superfamily II.
    
   0.426
SDH66690.1
Glyoxylase, beta-lactamase superfamily II.
    
   0.426
SDH80420.1
Glyoxylase, beta-lactamase superfamily II.
    
   0.426
Your Current Organism:
Variovorax sp. OV700
NCBI taxonomy Id: 1882826
Other names: V. sp. OV700
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.