STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ07273.1Transcriptional regulator, DeoR family. (254 aa)    
Predicted Functional Partners:
SDJ07240.1
Nudix-type nucleoside diphosphatase, YffH/AdpP family.
 
 
  0.705
SDI43623.1
Homodimeric glycerol 3-phosphate dehydrogenase (quinone); Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.597
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
  
 0.585
SDJ07310.1
EamA-like transporter family protein.
       0.576
SDJ07333.1
tRNA threonylcarbamoyladenosine biosynthesis protein TsaB.
       0.576
SDH86130.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
    
   0.567
SDI25777.1
D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
     
 0.557
SDJ07201.1
D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4).
       0.552
nadK
NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
   
 
 0.551
SDJ11633.1
PTS IIA-like nitrogen-regulatory protein PtsN.
 
  
 0.535
Your Current Organism:
Variovorax sp. OV700
NCBI taxonomy Id: 1882826
Other names: V. sp. OV700
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.