STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA15805.1Uncharacterized protein. (359 aa)    
Predicted Functional Partners:
SEA15773.1
Protein of unknown function.
 
  
 0.950
SEA15836.1
Hypothetical protein.
 
  
 0.945
SEA15753.1
Protein of unknown function.
 
    0.927
SEB15967.1
Hypothetical protein.
 
  
 0.826
SEB24665.1
Hypothetical protein.
 
  
 0.826
SEB24685.1
Hypothetical protein.
 
  
 0.826
SEB25101.1
Hypothetical protein.
 
  
 0.826
SEB15959.1
Protein of unknown function.
 
  
 0.825
SEB24662.1
Protein of unknown function.
 
  
 0.825
SEB24681.1
Protein of unknown function.
 
  
 0.825
Your Current Organism:
Variovorax sp. YR216
NCBI taxonomy Id: 1882828
Other names: V. sp. YR216
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.