STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA48136.1Alkyl hydroperoxide reductase subunit F. (525 aa)    
Predicted Functional Partners:
SEA48113.1
Peroxiredoxin (alkyl hydroperoxide reductase subunit C); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
 
 
 0.996
SEB05126.1
1-Cys peroxiredoxin.
  
 
 0.924
SEB22959.1
Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin).
  
 
 0.924
SEB16015.1
NADPH-dependent glutamate synthase beta chain.
    
 0.768
SEA69529.1
Starvation-inducible DNA-binding protein; Belongs to the Dps family.
 
  
 0.712
SEB21350.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.683
SEA00230.1
Thioredoxin reductase (NADPH).
 
 
0.661
SDZ97427.1
Thioredoxin reductase (NADPH).
  
 
0.657
SEA80850.1
Thioredoxin reductase (NADPH).
  
 
0.644
SEB16275.1
Thioredoxin.
  
 
 0.565
Your Current Organism:
Variovorax sp. YR216
NCBI taxonomy Id: 1882828
Other names: V. sp. YR216
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.