STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR78001.1alpha-L-rhamnosidase. (981 aa)    
Predicted Functional Partners:
SDS70359.1
Alpha-L-rhamnosidase N-terminal domain-containing protein.
  
  
  0.806
SDR84497.1
S-layer homology domain-containing protein.
  
  
  0.804
SDS91609.1
Alpha-L-rhamnosidase N-terminal domain-containing protein.
  
     0.774
SDT23904.1
Pullulanase, extracellular; Belongs to the glycosyl hydrolase 13 family.
    
 0.759
SDS46537.1
alpha-L-fucosidase.
  
     0.704
SDS91963.1
alpha-L-fucosidase.
  
     0.700
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.685
SDR78036.1
AraC-type DNA-binding protein.
 
     0.597
SDS03101.1
Protein of unknown function.
  
  
  0.566
SDT53873.1
beta-Glucocerebrosidase 2 N terminal.
  
   
 0.548
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.