STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR78823.1Sugar phosphate isomerase/epimerase. (295 aa)    
Predicted Functional Partners:
SDR78925.1
Hexulose-6-phosphate isomerase.
 
  
  0.932
SDS34802.1
Sugar phosphate isomerase/epimerase.
 
  
  0.923
SDS91924.1
Sugar phosphate isomerase/epimerase.
 
  
  0.922
SDS01593.1
L-fuculose-phosphate aldolase/L-ribulose-5-phosphate 4-epimerase.
  
 
  0.882
SDS34785.1
Predicted dehydrogenase.
 
 
  0.864
SDT44510.1
Gluconate kinase, FGGY family; Belongs to the FGGY kinase family.
  
 
 0.848
SDR78863.1
Predicted dehydrogenase.
 
 
  0.758
iolD
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Involved in the cleavage of the C1-C2 bond of 3D-(3,5/4)- trihydroxycyclohexane-1,2-dione (THcHDO) to yield 5-deoxy-glucuronate (5DG).
  
 
 0.742
SDR90143.1
Predicted dehydrogenase.
  
 
  0.714
SDS07754.1
Predicted dehydrogenase.
  
 
  0.653
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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