STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR83023.1Hypothetical protein. (190 aa)    
Predicted Functional Partners:
SDR83006.1
Superfamily II DNA or RNA helicase.
       0.784
SDR83061.1
AAA domain-containing protein.
       0.739
SDR83092.1
AAA domain-containing protein.
       0.732
SDR83132.1
Hypothetical protein.
       0.546
SDR83157.1
Hypothetical protein.
       0.546
SDR83221.1
Phage regulatory protein, rha family.
       0.526
SDR83193.1
Hypothetical protein.
       0.522
SDR82970.1
Hypothetical protein.
       0.442
SDR83278.1
Hypothetical protein.
       0.429
SDR83312.1
Hypothetical protein.
       0.429
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.