STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR88954.1Stage III sporulation protein AH. (256 aa)    
Predicted Functional Partners:
SDR89040.1
Stage III sporulation protein AG.
  
  
 0.960
SDS97474.1
Stage II sporulation protein Q.
   
 
 0.958
SDR89085.1
Stage III sporulation protein AF.
  
  
 0.920
SDR89348.1
Stage III sporulation protein AA.
  
  
 0.843
SDR89145.1
Stage III sporulation protein AE.
  
  
 0.834
SDR89310.1
Stage III sporulation protein AB.
  
  
 0.826
SDR89273.1
Stage III sporulation protein AC.
  
  
 0.751
SDR89229.1
Stage III sporulation protein AD.
  
  
 0.744
SDR88892.1
acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
     
 0.703
SDR84735.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
   
  
 0.519
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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