STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR99469.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (224 aa)    
Predicted Functional Partners:
SDR99422.1
His Kinase A (phospho-acceptor) domain-containing protein.
  0.977
SDT52930.1
GAF sensor hybrid histidine kinase.
  
0.977
SDT13954.1
PAS domain S-box-containing protein.
 0.926
SDS97386.1
Signal transduction histidine kinase.
 0.907
SDT52870.1
Signal transduction histidine kinase.
 
  0.882
SDT50388.1
Signal transduction histidine kinase.
 
  0.865
SDS50203.1
Signal transduction histidine kinase.
  
  0.858
SDS17820.1
Signal transduction histidine kinase.
  
  0.857
SDT55122.1
Signal transduction histidine kinase.
 
  0.856
SDS65046.1
HAMP domain-containing protein.
 
  0.852
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.